Acta Veterinaria et Zootechnica Sinica ›› 2024, Vol. 55 ›› Issue (12): 5641-5650.doi: 10.11843/j.issn.0366-6964.2024.12.027
• Preventive Veterinary Medicine • Previous Articles Next Articles
LI Xia1,2(), HE Yi3, CAI Xuhang2,4, LUO Runbo1, GUO Rongli2, SUOLANG Sizhu1,*(
), MAO Li1,2,*(
), LI Bin1,2
Received:
2024-02-04
Online:
2024-12-23
Published:
2024-12-27
Contact:
SUOLANG Sizhu, MAO Li
E-mail:2858768331@qq.com;xzslsz@163.com;mao-li@live.cn
CLC Number:
LI Xia, HE Yi, CAI Xuhang, LUO Runbo, GUO Rongli, SUOLANG Sizhu, MAO Li, LI Bin. Isolation, Identification and Whole Genome Analysis of Mammalian Orthoreovirus from Sheep[J]. Acta Veterinaria et Zootechnica Sinica, 2024, 55(12): 5641-5650.
Table 1
Primers table for MRV amplification"
引物名称 Primer name | 序列(5’→3’) Sequence | 片段大小/bp Fragment size |
MRV-F | TTCACTCAGGCATTATCCGA | 559 |
MRV-R | TCCGCTTCTGACTCCTGA | |
MRVL1-F | GCTACACGTTCCACGACAATGTCA | 3 854 |
MRVL1-R | GATGAGTTRACGCRCCACGRC | |
MRVL2-F | GCTATTGGCGCRATGGCGAAC | 3 915 |
MRVL2-R | GATGAATTAGGCRCGCTYACGA | |
MRVL3-F | GCTAATCGTCAGGATGAAGCGGA | 3 901 |
MRVL3-R | GATGARTCGGCCCAACTAGCATY | |
MRVM1-F | GCTATTCGCGGTCATGGCTTACAT | 2 304 |
MRVM1-R | GATGAAGCGCGTACGTAGTCYTAG | |
MRVM2-F | GCTAATCTGCTGACCGTYACTCT | 2 203 |
MRVM2-R | GATGATKTGCCTGCATCCCTTAACC | |
MRVM3-F | ATGGCTTCATTCAAGGGAT | 2 166 |
MRVM3-R | TTACAGCTCATCRGTTGGAAC | |
MRVS1-F | GCTATTCGCGCCTATGGATGCR | 1 466 |
MRVS1-R | GATGATTGACCCCTTGTGCCGA | |
MRVS2-F | GCTATTCGCTGGTCAGTTATGGCT | 1 331 |
MRVS2-R | GATGAATGTGTGGTCAGTCGYGAG | |
MRVS3-F | GCTAAAKTCACGCCTGTYGTCGT | 1 198 |
MRVS3-R | GATGATTAGGCGYCACCCACCA | |
MRVS4-F | GCTATTTTTGCCTCTTCCYAAACG | 1 196 |
MRVS4-R | GATGAATGRAGCCTGTCCCACGT |
Table 2
MRV strains referenced in this study"
参考株 Reference strains | 宿主或来源 Host or origin | 国家 Country |
SD-14 | 水貂Mink | 中国China |
WIV3 | 蹄蝠(未定种)Hipposideros sp. | 中国China |
WIV4 | 蹄蝠(未定种)Hipposideros sp. | 中国China |
ZJ2013 | 猪Pig | 中国China |
YNSZ/V207/2016 | 牛Cattle | 中国China |
HLJYC2017 | 猪Swine | 中国China |
MRV3/TS/China/2012 | 树鼩Tree shrew | 中国China |
BtMRV-QAPpC66 | 伏翼蝠(XJC66)Pipistrellus pipistrellus XJC66 | 中国China |
GD-1 | 猪Porcine | 中国China |
SC-A | 猪腹泻粪样Diarrhea feces of pigs | 中国China |
HB-A | 水貂Mink | 中国China |
THK0617 | 废水Waste water | 日本Japan |
Osaka2005 | 人Homo sapiens | 日本Japan |
BatMRV2/SNU1/Korea/2021 | 草原带须蝙蝠Myotis aurascens | 韩国South Korea |
17-EF40 | 大棕蝠Eptesicus fuscus | 美国USA |
C/bovine/Indiana/MRV00304/2014 | 牛Bovine | 美国USA |
SHR-A | 猪Porcine | 中国China |
Ndelle | 西非小家鼠Mus musculoides | 喀麦隆Cameroon |
MRV3/TS/China/2012 | 树鼩Tree shrew | 中国China |
Fig. 3
Phylogenetic trees based on the S1 gene of XJ23 virus from this study and previously published MRV sequences from GenBank. The Neighbor-joining method was used for construction of the phylogenetic tree with bootstrap values of 1000 replicates shown at the branches. The scale bar represents the p-distance"
1 |
KOBAYASHIT.[Orthoreoviruses][J].Uirusu,2014,64(2):191-202.
doi: 10.2222/jsv.64.191 |
2 | OUATTARAL A,BARINF,BARTHEZM A,et al.Novel human reovirus isolated from children with acute necrotizing encephalopathy[J].Emerg Infect Dis,2011,17(8):1436-1444. |
3 | NARAYANAPPAA T,SOORYANARAINH,DEVENTHIRANJ,et al.A novel pathogenic Mammalian orthoreovirus from diarrheic pigs and Swine blood meal in the United States[J].mBio,2015,6(3):e00593-15. |
4 |
ARNABOLDIS,RIGHIF,FILIPELLOV,et al.Mammalian orthoreovirus (MRV) is widespread in wild ungulates of northern Italy[J].Viruses,2021,13(2):238.
doi: 10.3390/v13020238 |
5 |
AHASANM S,SUBRAMANIAMK,SAYLERK A,et al.Molecular characterization of a novel reassortment Mammalian orthoreovirus type 2 isolated from a Florida white-tailed deer fawn[J].Virus Res,2019,270,197642.
doi: 10.1016/j.virusres.2019.197642 |
6 |
TYLERK L,BARTONE S,IBACHM L,et al.Isolation and molecular characterization of a novel type 3 reovirus from a child with meningitis[J].J Infect Dis,2004,189(9):1664-1675.
doi: 10.1086/383129 |
7 |
STEYERA,GUTIÉRREZ-AGUIREI,KOLENCM,et al.High similarity of novel orthoreovirus detected in a child hospitalized with acute gastroenteritis to mammalian orthoreoviruses found in bats in Europe[J].J Clin Microbiol,2013,51(11):3818-3825.
doi: 10.1128/JCM.01531-13 |
8 |
CHUAK B,VOONK,CRAMERIG,et al.Identification and characterization of a new orthoreovirus from patients with acute respiratory infections[J].PLoS One,2008,3(11):e3803.
doi: 10.1371/journal.pone.0003803 |
9 |
CHUAK B,VOONK,YUM,et al.Investigation of a potential zoonotic transmission of orthoreovirus associated with acute influenza-like illness in an adult patient[J].PLoS One,2011,6(10):e25434.
doi: 10.1371/journal.pone.0025434 |
10 |
WANGL P,LIY,WALSHT,et al.Isolation and characterization of novel reassortant mammalian orthoreovirus from pigs in the United States[J].Emerg Microbes Infect,2021,10(1):1137-1147.
doi: 10.1080/22221751.2021.1933608 |
11 |
DAIY M,ZHOUQ F,ZHANGC W,et al.Complete genome sequence of a porcine orthoreovirus from southern China[J].J Virol,2012,86(22):12456.
doi: 10.1128/JVI.02254-12 |
12 |
ZHANGC F,LIUL C,WANGP Z,et al.A potentially novel reovirus isolated from swine in northeastern China in 2007[J].Virus Genes,2011,43(3):342-349.
doi: 10.1007/s11262-011-0642-4 |
13 |
CAOD J,SOORYANARAINH,YUGOD M,et al.Evaluation of the pathogenicity of mammalian orthoreovirus type 3 (MRV3) in germ-free gnotobiotic pigs and of the efficacy of an inactivated vaccine against MRV3 infection in neonatal conventional piglets[J].Vet Microbiol,2018,224,23-30.
doi: 10.1016/j.vetmic.2018.08.019 |
14 |
SPRIGGSD R,FIELDSB N.Attenuated reovirus type 3 strains generated by selection of haemagglutinin antigenic variants[J].Nature,1982,297(5861):68-70.
doi: 10.1038/297068a0 |
15 |
WEINERH L,DRAYNAD,AVERILLJR D J,et al.Molecular basis of reovirus virulence: role of the S1 gene[J].Proc Natl Acad Sci U S A,1977,74(12):5744-5748.
doi: 10.1073/pnas.74.12.5744 |
16 | 吕珽,陈虹吟,汤承,等.牦牛源正呼肠孤病毒2型的检测和分离鉴定[J].畜牧兽医学报,2021,52(8):2361-2368. |
LVT,CHENH Y,TANGC,et al.Detection, isolation and identification of mammalian orthoreovirus serotype 2 in yaks[J].Acta Veterinaria et Zootechnica Sinica,2021,52(8):2361-2368. | |
17 |
KOBAYASHIT,OOMSL S,IKIZLERM,et al.An improved reverse genetics system for mammalian orthoreoviruses[J].Virology,2010,398(2):194-200.
doi: 10.1016/j.virol.2009.11.037 |
18 |
FEHÉRE,KEMENESIG,OLDALM,et al.Isolation and complete genome characterization of novel reassortant orthoreovirus from common vole (Microtus arvalis)[J].Virus Genes,2017,53(2):307-311.
doi: 10.1007/s11262-016-1411-1 |
19 |
LELLID,MORENOA,STEYERA,et al.Detection and characterization of a novel reassortant mammalian orthoreovirus in bats in Europe[J].Viruses,2015,7(11):5844-5854.
doi: 10.3390/v7112908 |
20 |
WANGL H,FUS H,CAOL,et al.Isolation and identification of a natural reassortant mammalian orthoreovirus from least horseshoe bat in China[J].PLoS One,2015,10(3):e0118598.
doi: 10.1371/journal.pone.0118598 |
21 | 李占鸿,肖雷,李卓然,等.云南牛血液标本中哺乳动物正呼肠孤病毒(YNSZ/V207/2017)的分离鉴定[J].中国人兽共患病学报,2022,38(1):1-9. |
LIZ H,XIAOL,LIZ R,et al.Isolation and identification of mammalian orthoreovirus (YNSZ/V207/2017) from bovine blood samples in Yunnan[J].Chinese Journal of Zoonoses,2022,38(1):1-9. | |
22 | 覃盼,王经纬,王斌,等.中国东部5省猪呼肠孤病毒流行病学调查与分析[J].浙江大学学报: 农业与生命科学版,2017,43(5):631-638. |
QINP,WANGJ W,WANGB,et al.Epidemiological survey and analysis of mammalian orthoreovirus 3 in diarrheic pigs from five provinces of east China[J].Journal of Zhejiang University: Agriculture & Life Sciences,2017,43(5):631-638. | |
23 | 常继涛,李鑫,张亚科,等.犊牛腹泻粪样中牛呼肠孤病毒的分离鉴定[J].中国预防兽医学报,2008,30(9):711-715. |
CHANGJ T,LIX,ZHANGY K,et al.Isolation and identification of bovine reovirus from feces of the calves suffered from diarrhea[J].Chinese Journal of Preventive Veterinary Medicine,2008,30(9):711-715. | |
24 |
LIANH,LIUY,ZHANGS F,et al.Novel orthoreovirus from mink, China, 2011[J].Emerg Infect Dis,2013,19(12):1985-1988.
doi: 10.3201/eid1912.130043 |
25 |
YED D,JIZ Y,SHIH Y,et al.Molecular characterization of an emerging reassortant mammalian orthoreovirus in China[J].Arch Virol,2020,165(10):2367-2372.
doi: 10.1007/s00705-020-04712-5 |
26 | 国家统计局.中华人民共和国2022年国民经济和社会发展统计公报[J].中国统计,2023,(3):12-29. |
National Bureau of Statistics.Statistical communiqué of the people's republic of China on national economic and social development in 2022[J].China Statistics,2023,(3):12-29. |
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