畜牧兽医学报 ›› 2022, Vol. 53 ›› Issue (11): 4110-4115.doi: 10.11843/j.issn.0366-6964.2022.11.036

• 研究简报 • 上一篇    下一篇

鼠伤寒沙门菌伴侣蛋白Hfq与小RNA GcvB结合位点的初步分析

令狐远凤1,2, 潘永3, 杨阳1,2, 段世宇1,2, 张家莉1,2, 张宝太1,2, 杨琦1,2*   

  1. 1. 贵州大学动物科学学院, 贵阳 550025;
    2. 贵州大学动物疫病研究所, 贵阳 550025;
    3. 贵州省农业科学院畜牧兽医研究所, 贵阳 550025
  • 收稿日期:2022-02-17 出版日期:2022-11-23 发布日期:2022-11-25
  • 通讯作者: 杨琦,主要从事动物微生物学研究,E-mail:yangqinmg@163.com
  • 作者简介:令狐远凤(1997-),贵州遵义人,女,硕士生,主要从事动物微生物学研究,E-mail:3319314357@qq.com
  • 基金资助:
    国家自然科学基金(31760740);贵州省研究生教育创新计划项目(GZZ2017002)

Preliminary Exploration of Binding Sites of Salmonella Typhimurium Chaperone Protein Hfq on Small RNA GcvB

LINGHU Yuanfeng1,2, PAN Yong3, YANG Yang1,2, DUAN Shiyu1,2, ZHANG Jiali1,2, ZHANG Baotai1,2, YANG Qi1,2*   

  1. 1. College of Animal Science, Guizhou University, Guiyang 550025, China;
    2. Institute of Animal Diseases, Guizhou University, Guiyang 550025, China;
    3. Institute of Animal Husbandry and Veterinary Medicine, Guizhou Academy of Agricultural Sciences, Guiyang 550025, China
  • Received:2022-02-17 Online:2022-11-23 Published:2022-11-25

摘要: 旨在探究Hfq与GcvB可能的作用结合位点,本研究首先筛查GcvB中Hfq结合偏好型富U基序。通过λ-Red同源重组酶系统构建GcvB富U基序突变或截短菌株,构建GcvB终止子茎延伸菌株。运用P22噬菌体转导技术构建相应的hfq基因缺失菌株以及oppA::lacZ基因融合菌株。通过qRT-PCR检测重组菌株的gcvB基因转录水平,β-半乳糖苷酶试验检测oppA基因编码蛋白水平。预测结果显示,GcvB存在2个Hfq结合偏好型富U基序U5和U8。qRT-PCR结果显示,U5基序的突变未造成gcvB基因转录水平明显的变化,而gcvB基因转录水平随U8基序的截短而下调,截短为U5和U4时下调最为明显,分别下调40.5%和37.5%。延伸U4截短菌株的GcvB终止子茎,结果发现,gcvB基因转录水平几乎恢复到了对照组的水平,同时也发现,尽管U4截短菌株gcvB基因转录水平得以恢复,却丧失了Hfq协同GcvB转录后负调控oppA mRNA的能力。以上结果表明,U5基序与Hfq维持GcvB稳定性无明显关联。U8基序对Hfq协助GcvB转录后负调控oppA mRNA以及维持GcvB稳定性是重要的,推测其为Hfq与GcvB的作用结合位点。

关键词: 沙门菌, λ-Red同源重组系统, GcvB, 伴侣蛋白Hfq, oppA

Abstract: To explore the possible binding sites of Hfq on GcvB, in this study, the Hfq binding preference U-rich motif in GcvB was screened. The mutant and truncated strains of the GcvB U-rich motif were constructed by the λ-Red homologous recombinase system, and the GcvB terminator stem extension strain was constructed at the same time. P22 phage transduction technology was used to construct corresponding hfq gene deletion strains and oppA::lacZ gene fusion strains. The gcvB gene transcription expression level of the recombinant strain was detected by qRT-PCR, and the oppA gene protein expression level was detected by the β-galactosidase test. The results showed that the mutation of U5 motif did not cause obvious changes in the transcription and expression level of gcvB gene, but when the U8 motif was truncated to U5 and U4, it was reduced by 40.5% and 37.5%, respectively. After the GcvB terminator stem of the U4 truncated strain was extended, it was discovered that the transcription and expression level of gcvB gene was restored,but the ability to Hfq negatively regulating oppA mRNA was weakened after co-transcription. The above results show that the U5 motif has no obvious relationship with Hfq maintaining the stability of GcvB,but the U8 motif is important for Hfq to assist GcvB with regulating oppA mRNA negatively after co-transcription and maintain GcvB stability. In summary, we speculate that the U8 motif is the binding site of Hfq on GcvB.

Key words: Salmonella, λ-Red homologous recombination system, GcvB, chaperone Hfq, oppA

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