Acta Veterinaria et Zootechnica Sinica ›› 2024, Vol. 55 ›› Issue (7): 3064-3074.doi: 10.11843/j.issn.0366-6964.2024.07.025
• Preventive Veterinary Medicine • Previous Articles Next Articles
Yiming GAO1,2(), Guosheng CHEN1,2, Shiting NI1,2, Ze TONG1,2, Haonan WANG3, Fan YANG1,2, Lijun YANG1,2, Yupeng MO3,*(
), Chen TAN1,2,*(
)
Received:
2023-08-28
Online:
2024-07-23
Published:
2024-07-24
Contact:
Yupeng MO, Chen TAN
E-mail:gym1994@webmail.hzau.edu;741623673@qq.com;tanchen@mail.hzau.edu.cn
CLC Number:
Yiming GAO, Guosheng CHEN, Shiting NI, Ze TONG, Haonan WANG, Fan YANG, Lijun YANG, Yupeng MO, Chen TAN. Investigation and Analysis of Infection Status of Mycoplasma hyopneumoniae in Pigs in Selected Areas of Southern China, 2022[J]. Acta Veterinaria et Zootechnica Sinica, 2024, 55(7): 3064-3074.
Table 1
Primers for molecular epidemiological analysis"
类型 Type | 引物名称 Primer name | 引物序列(5′-3′) Primer sequence | 退火温度/℃ Tm | 产物大小/bp Product size |
MLST管家基因扩增引物 MLST housekeeping gene amplification primer | adk-F | CCCAGGAGAACAGACTGAAGA | 59 | 1 148 |
adk-R | GCTGGTTTTGCATTTCGGCT | |||
rpoB-F | GCGGTTCACTTCGGGTAGAA | 59 | 1 848 | |
rpoB-R | TAGCAACAAGTGGGGCTTCTG | |||
tpiA-F | CCTTCTAATTTCGTCATCGCGG | 59 | 1 225 | |
tpiA-R | AGTGCAATCTGAACGCTTGT | |||
MLST管家基因测序引物 MLST housekeeping gene sequencing primer | adk-SF | AGCAACAACTACACTTGAAACGA | 59 | 874 |
adk-SR | TGCCAGCAATTTTCAACTGG | |||
rpoB-SF | AGTGATGATCCAGATTCGCTTGT | 59 | 640 | |
rpoB-SR | TGTAATTGACTTGTTCGGCATC | |||
tpiA-SF | CCTTCTAATTTCGTCATCGCGG | 59 | 1 225 | |
tpiA-SR | AGTGCAATCTGAACGCTTGT | |||
p146基因扩增/ 测序引物 p146 gene amplification/ sequencing primer | P146S-F | CGAACGTGGATGGATGTCAACT | 59 | 870~910 |
P146S-R | GTCTGACCCATTTGTTGGCCATTAT | |||
p36基因扩增/ 测序引物 p36 gene amplification/ sequencing primer | P36FL-F | AACACGCCACCAGGAATTGA | 59 | 1 775 |
P36FL-R | AGGCGTGCAACCTATAGCAG | |||
p97基因扩增/ 测序引物 p97 gene amplification/ sequencing primer | P97R1-F | GCCTATGAATTCGGGGCCTTTA | 59 | 1 189~1 417 |
P97R1-R | CGGTCATCATTGGGTGGCTA |
Table 2
Quantitative Real-time PCR results of two sampling methods"
编号 No. | 猪场A Farm A | 猪场B Farm B | |||||||||
鼻拭子 Nasal swab | 喉拭子 Laryngeal swab | 鼻拭子 Nasal swab | 喉拭子 Laryngeal swab | ||||||||
Ct值 Ct value | 结果判定 Result | Ct值 Ct value | 结果判定 Result | Ct值 Ct value | 结果判定 Result | Ct值 Ct value | 结果判定 Result | ||||
1 | / | - | 34.36 | + | / | - | / | - | |||
2 | 36.03 | + | 28.79 | + | / | - | / | - | |||
3 | / | - | 29.50 | + | / | - | / | - | |||
4 | 36.97 | + | 28.95 | + | / | - | / | - | |||
5 | 36.98 | + | 27.45 | + | / | - | / | - | |||
6 | 36.55 | + | 28.72 | + | / | - | / | - | |||
7 | / | - | 26.17 | + | / | - | / | - | |||
8 | / | - | 28.41 | + | / | - | / | - | |||
9 | / | - | 23.20 | + | / | - | / | - | |||
10 | 32.48 | + | 27.51 | + | / | - | / | - | |||
11 | / | - | 32.84 | + | / | - | / | - | |||
12 | / | - | 31.96 | + | / | - | / | - | |||
13 | / | - | 27.86 | + | / | - | / | - | |||
14 | / | - | 20.82 | + | / | - | 33.49 | + | |||
15 | / | / | / | / | / | - | 35.75 | + | |||
16 | / | / | / | / | / | - | 33.37 | + | |||
检出率/% Detection rate | 35.71(5/14) | 100.00(14/14) | 0.00(0/16) | 18.75(3/16) |
Table 3
Detection results of Real-time PCR for M. hyopneumoniae %"
猪场 Farm | 位置 Location | 0~1胎母猪检出率 Detection rate of 0-1 parity sows | ≥2胎母猪检出率 Detection rate of ≥2 parity sows | 母猪检出率* Detection rate of all sows | 场检出率 Field detection rate |
A | 广西 | 20.83(5/24) | 0.00(0/46) | 7.14(5/70) | 66.67 |
B | 广西 | 16.67(4/24) | 2.17(1/46) | 7.14(5/70) | (14/21) |
C | 广西 | 33.33(4/12) | 15.52(9/58) | 18.57(13/70) | |
D | 广西 | 0.00(0/31) | 0.00(0/39) | 0.00(0/70) | |
E | 广东 | 0.00(0/11) | 0.00(0/59) | 0.00(0/70) | |
F | 广西 | 18.75(3/16) | 1.85(1/54) | 5.71(4/70) | |
G | 广西 | 1.92(1/52) | 0.00(0/18) | 1.43(1/70) | |
H | 湖南 | 0.00(0/18) | 0.00(0/52) | 0.00(0/70) | |
I | 广西 | 20.59(7/34) | 2.78(1/36) | 11.43(8/70) | |
J | 广西 | 1.39(1/72) | / | 1.39(1/72) | |
K | 贵州 | 0.00(0/49) | 0.00(0/21) | 0.00(0/70) | |
L | 广西 | 12.50(4/32) | 0.00(0/38) | 5.71(4/70) | |
M | 广西 | 47.37(9/19) | 3.92(2/51) | 15.71(11/70) | |
N | 贵州 | 7.89(3/38) | 7.89(3/38) | 7.89(6/76) | |
O | 广西 | 29.03(9/31) | 0.00(0/39) | 12.86(9/70) | |
P | 海南 | 18.57(13/70) | / | 18.57(13/70) | |
Q | 广西 | 10.53(2/19) | 1.96(1/51) | 4.29(3/70) | |
R | 广西 | 0.00(0/23) | 0.00(0/47) | 0.00(0/70) | |
S | 海南 | 0.00(0/7) | 0.00(0/63) | 0.00(0/70) | |
T | 四川 | 11.63(5/43) | 11.11(3/27) | 11.43(8/70) | |
U | 云南 | 0.00(0/22) | 0.00(0/48) | 0.00(0/70) | |
总计Total | 10.05 (65/647) | 2.17 (18/831) | 5.62 (83/1 478) |
Fig. 3
Amino-acid sequence variations of the P97R1 protein and the serine repeat region of P146 protein A. Amino acid sequence differences in the P97R1 protein; B. Amino acid sequence differences in the serine repeat region of P146 protein; C. Repeat characteristics statistics of the P97R1 protein and the serine repeat region of P146 protein"
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