[1] |
WILLOUGHBY J R,IVY J A,LACY R C,et al.Inbreeding and selection shape genomic diversity in captive populations:Implications for the conservation of endangered species[J].PLoS One,2017,12(4):e0175996.
|
[2] |
KRISTENSEN T N,PEDERSEN K S,VERMEULEN C J,et al.Research on inbreeding in the ‘omic’ era[J].Trends Ecol Evol,2010,25(1):44-52.
|
[3] |
ARMBRUSTER P,REED D H.Inbreeding depression in benign and stressful environments[J].Heredity (Edinb),2005, 95(3):235-242.
|
[4] |
CHEPTOU P O,DONOHUE K.Environment-dependent inbreeding depression:its ecological and evolutionary significance[J]. New Phytol, 2011,189(2):395-407.
|
[5] |
FOX C W,REED D H.Inbreeding depression increases with environmental stress:an experimental study and meta-analysis[J].Evolution,2011,65(1):246-258.
|
[6] |
REED D H,FOX C W,ENDERS L S,et al.Inbreeding-stress interactions:evolutionary and conservation consequences[J].Ann N Y Acad Sci,2012,1256:33-48.
|
[7] |
ENDERS L S,NUNNEY L.Sex-specific effects of inbreeding in wild-caught Drosophila melanogaster under benign and stressful conditions[J].J Evol Biol,2010,23(11):2309-2323.
|
[8] |
PILAKOUTA N,JAMIESON S,MOORAD J A,et al.Parental care buffers against inbreeding depression in burying beetles[J].Proc Natl Acad Sci U S A,2015,112(26):8031-8035.
|
[9] |
BOSSDORF O,RICHARDS C L,PIGLIUCCI M.Epigenetics for ecologists[J].Ecol Lett,2008,11(2):106-115.
|
[10] |
丁勇,许超,吴季辉,等.表观遗传学研究进展[J].中国科学:生命科学,2017,47(1):3-15.DING Y,XU C,WU J H,et al.Recent progress in epigenetics[J].Scientia Sinica Vitae,2017,47(1):3-15.(in Chinese)
|
[11] |
甘麦邻,杨大洪,谭娅,等.环境因素引起的哺乳动物跨代DNA甲基化修饰现象[J].畜牧兽医学报,2017,48(12):2225-2231.GAN M L,YANG D H,TAN Y,et al.The study of influence of environment on transgenerational inheritance of DNA methylation in mammals[J].Acta Veterinaria et Zootechnica Sinica,2017,48(12):2225-2231.(in Chinese)
|
[12] |
HOWARD J T,PRYCE J E,BAES C,et al.Invited review:Inbreeding in the genomics era:Inbreeding,inbreeding depression,and management of genomic variability[J].J Dairy Sci,2017,100(8):6009-6024.
|
[13] |
CHEPTOU P O,DONOHUE K.Epigenetics as a new avenue for the role of inbreeding depression in evolutionary ecology[J]. Heredity (Edinb),2013,110(3):205-206.
|
[14] |
VERGEER P,WAGEMAKER N,OUBORG N J.Evidence for an epigenetic role in inbreeding depression[J].Biol Lett,2012, 8(5):798-801.
|
[15] |
HONG Y,HONG S H,OH Y M,et al.Identification of lung cancer specific differentially methylated regions using genome-wide DNA methylation study[J].Mol Cell Toxicol,2018,14(3):315-322.
|
[16] |
晏强,周献青,薛雯,等.表观遗传DNA甲基化和组蛋白修饰与疾病关系的研究进展[J].医学综述,2017, 23(16):3160-3163,3169.YAN Q,ZHOU X Q,XUE W,et al.Advances in the relationship between epigenetic DNA methylation and histone modification with diseases[J].Medical Recapitulate,2017,23(16):3160-3163,3169.(in Chinese)
|
[17] |
ELHAMAMSY A R.DNA methylation dynamics in plants and mammals:overview of regulation and dysregulation[J].Cell Biochem Funct,2016,34(5):289-298.
|
[18] |
YANG K L,LIANG L L,RAN F L,et al.The DmtA methyltransferase contributes to Aspergillus flavus conidiation,sclerotial production,aflatoxin bio-synthesis and virulence[J].Sci Rep,2016,6(1):23259.
|
[19] |
赵亚涵,郝海生,杜卫华,等.新鲜、玻璃化冷冻牛卵母细胞体外受精囊胚全基因组甲基化模式初探[J].畜牧兽医学报, 2019,50(6):1179-1188.ZHAO Y H,HAO H S,DU W H,et al.Study on whole genome methylation pattern of in vitro fertilized blastocysts from fresh and vitrified bovine oocytes[J].Acta Veterinaria et Zootechnica Sinica,2019,50(6):1179-1188.(in Chinese)
|
[20] |
MEHTA A,DOBERSCH S,ROMERO-OLMEDO A J,et al.Epigenetics in lung cancer diagnosis and therapy[J].Cancer Metastasis Rev,2015,34(2):229-241.
|
[21] |
MENG H,CAO Y,QIN J,et al.DNA methylation,its mediators and genome integrity[J].Int J Biol Sci,2015,11(5):604-617.
|
[22] |
匡颖,邓涛,王龙,等.近交系ES鼠胚胎发育及印迹异常的研究[C]//中国遗传学会"发育、遗传和疾病"研讨会论文汇编集.乌鲁木齐:中国遗传学会,2007.KUANG Y,DENG T,WANG L,et al.Study on embryonic development and imprinting abnormalities of inbred ES mice[C]//Chinese Genetic Society Seminar Papers on "Development,Heredity and Disease".2007.(in Chinese)
|
[23] |
蒋曹德.猪DNA甲基化与杂种表现的关系及遗传多样性分析[D].武汉:华中农业大学,2004.JIANG C D.Relationship between DNA methylation and hybrid performances and pigs genetic diversity analysis[D].Wuhan:Huazhong Agricultural University,2004.(in Chinese)
|
[24] |
VENNEY C J,JOHANSSON M L,HEATH D D.Inbreeding effects on gene-specific DNA methylation among tissues of Chinook salmon[J].Mol Ecol,2016,25(18):4521-4533.
|
[25] |
杨晶淼,蔡炜裕,罗少杰,等.马氏珠母贝(Pinctada fucata martensii)近交家系与其杂交子代DNA甲基化差异分析[J].基因组学与应用生物学,2018,37(5):1926-1932.YANG J M,CAI W Y,LUO S J,et al.Variation analysis of DNA methylation in inbred and hybrid families of pearl oyster (Pinctada fucata martensii)[J].Genomics and Applied Biology,2018,37(5):1926-1932. (in Chinese)
|
[26] |
NAKAMURA S,HOSAKA K.DNA methylation in diploid inbred lines of potatoes and its possible role in the regulation of heterosis[J].Theor Appl Genet,2010,120(2):205-214.
|
[27] |
HAN W,XUE Q,LI G H,et al.Genome-wide analysis of the role of DNA methylation in inbreeding depression of reproduction in Langshan chicken[J].Genomice,2020,112(4):2677-2687.
|
[28] |
MARTIN M.Cutadapt removes adapter sequences from high-throughput sequencing reads[J].EMBnet J,2011,17(1):10-12.
|
[29] |
ETHERINGTON G J,RAMIREZ-GONZALEZ R H,MACLEAN D.bio-samtools 2:a package for analysis and visualization of sequence and alignment data with SAMtools in Ruby[J].Bioinformatics,2015,31(15):2565-2567.
|
[30] |
AKALIN A,KORMAKSSON M,LI S,et al.MethylKit:a comprehensive R package for the analysis of genome-wide DNA methylation profiles[J].Genome Biol,2012,13(10):R87.
|
[31] |
IOSHIKHES I P,ZHANG M Q.Large-scale human promoter mapping using CpG islands[J].Nat Genet,2000,26(1):61-63.
|
[32] |
RICE P,LONGDEN I,BLEASBY A.EMBOSS:the european molecular biology open software suite[J].Trends Genet,2000,16(6):276-277.
|
[33] |
CHAPMAN A G,COTTON A M,KELSEY A D,et al.Differentially methylated CpG island within human XIST mediates alternative P2 transcription and YY1 binding[J].BMC Genet,2014,15(1):89.
|
[34] |
郭添福,张志燕,陈冬,等.不同性别大白猪肌肉全基因组高分辨率单碱基甲基化差异分析[J].畜牧兽医学报,2018,49(11):2326-2339.GUO T F,ZHANG Z Y,CHEN D,et al.High resolution and single base genome-wide methylation variance analysis of muscle of large white pigs with different sexes[J].Acta Veterinaria et Zootechnica Sinica,2018,49(11):2326-2339.(in Chinese)
|
[35] |
杜小龙,王麒,张乐超,等.山羊DCT基因启动子区甲基化水平、SNP与毛色特征关系研究[J].畜牧兽医学报, 2019,50(2):271-279.DU X L,WANG Q,ZHANG L C,et al.Study on the relationship between methylation level,SNP in promoter region of DCT gene and hair color in goat[J].Acta Veterinaria et Zootechnica Sinica,2019,50(2):271-279. (in Chinese)
|
[36] |
胡慧艳,贾青,侯胜奎,等.猪DKK1基因启动子区的克隆及其活性分析[J].畜牧兽医学报,2017,48(6):1150-1157.HU H Y,JIA Q,HOU S K,et al.Cloning and activity analysis of the promoter region of swine DKK1 Gene[J].Acta Veterinaria et Zootechnica Sinica,2017,48(6):1150-1157.(in Chinese)
|
[37] |
CHAMBERS S,TARASOV K,AON M A,et al.Metabolic enzyme acetylation is elicited in response to stress induced by cardiac specific overexpression of human ADCY8[J].FASEB J,2020,34(S1):1.
|
[38] |
LAMB J R,MICHAUD W A,SIKORSKI R S,et al.Cdc16p,Cdc23p and Cdc27p form a complex essential for mitosis[J].EMBO J,1994,13(18):4321-4328.
|
[39] |
XIN Y F,NING S L,ZHANG L,et al.CDC27 facilitates gastric cancer cell proliferation,invasion and metastasis via twist-induced epithelial-mesenchymal transition[J].Cell Physiol Biochem,2018,50(2):501-511.
|
[40] |
ABBASPOURKHARYEKI M,ANVEKAR N J,RAMACHANDRA N B.The possible role of point mutations and activation of the CDC27 gene in progression of multiple myeloma[J].Meta Gene,2020,26:100761.
|