畜牧兽医学报 ›› 2006, Vol. 37 ›› Issue (5): 514-517.doi:

• 研究简报 • 上一篇    下一篇

鸽源冠状病毒PSH中国分离株S1基因克隆及分子进化分析

钱华冬;吴祖立;朱建国;华修国
  

  1. 上海交通大学农业与生物学院动物科学系,上海 201101
  • 收稿日期:1900-01-01 修回日期:1900-01-01 出版日期:2006-05-25 发布日期:2006-05-25

Clone and Phylogenetic Analysis of S1 Gene of Coronavirus Isolated from Pigeon in China

QIAN Hua-dong;WU Zu-li;ZHU Jian-guo ; HUA Xiu-guo   

  1. School of Agriculture and Biology, Shanghai Jiaotong University, Shanghai 201101, China
  • Received:1900-01-01 Revised:1900-01-01 Online:2006-05-25 Published:2006-05-25

摘要: 对分离鉴定的鸽源冠状病毒PSH株纤突蛋白S1基因进行RT-PCR法扩增、克隆和序列测定分析。结果表明其S1基因由1 626个核苷酸组成,编码541个氨基酸,S蛋白的切割识别位点为精氨酸-精氨酸-苯丙氨酸-精氨酸-精氨酸(RRFRR),与常见的鸡传染性支气管炎病毒(IBV)S蛋白切割识别位点相似(RRF/SRR)。该病毒与火鸡蓝冠病病毒(TCV)Gh、G1株S1基因推导的氨基酸同源性仅为24.7%、25%,而与IBV H52、H120、M41、Beau、Conn、Gray、Hotel、SH1、SH2、SH5、SH6基因推导的氨基酸同源性在75.0%~99.6%,其中与SH2、SH5的氨基酸同源性更是达到了99.6%,进一步证明该冠状病毒可能来源于IBV。

Abstract: The S1 gene of the pigeon original coronavirus (PSH) which was first isolated and identified in China was amplified by reverse transcription-polymerase chain reaction (RT-PCR) method, then it was cloned and sequenced. The results showed that the S1 gene of PSH was 1 626bp and encoded a polypeptide of 541 amino acids. The cleavage site sequence of S1 protein of PSH contains five consecutive basic amino acids, namely, Arg-Arg-Phe-Arg-Arg which is similar to the most IBV strains. Sequence data demonstrated that the complete S1 amino acid of PSH shared 75.0%-99.6% similarity with the published S1 sequences of M41,H52,H120,Beau,Gray,Holte,Conn,SH1,SH2,SH5 and SH6 IBV strains.But it only shared 24.7%,25% similarity with TCV Gh and G1 strain respectively. Based on these findings, the virus has been tentatively identified as a novel pathogenic field IBV strain, generated through recombination.