Comparative Transcriptome Analysis between Yak and Cattle Estrus Ovary
LAN Dao-liang 1,2,XIONG Xian-rong 2,CHAI Zhi-xin 1,AI Yi 1,HUANG Cai 2,LI Jian 1,2*
(1.Institute of Qinghai-Tibetan Plateau,Southwest University for Nationalities,Chengdu 610041,China;2.College of Life Science and Technology,Southwest University for Nationalities,Chengdu 610041, China)
[1]QIU Q,ZHANG G,MA T,et al.The yak genome and adaptation to life at high altitude[J].Nat Genet,2012,44(8):946-949.
[2]XIONG X,FU M,LAN D,et al.Yak response to high-altitude hypoxic stress by altering mRNA expression and DNA methylation of hypoxia-inducible factors[J].AnimBiotechnol,2015,26(3):222-229.
[3]MIAO F,GUO Z,XUE R,et al.Effects of grazing and precipitation on herbage biomass,herbage nutritive value,and yak performance in an alpine meadow on the Qinghai-Tibetan Plateau[J].PLoS One,2015,10(6):e0127275.
[4]FU M,CHEN Y,XIONG X,et al.Establishment of mammary gland model in vitro:culture and evaluation of a yak mammary epithelial cell line[J].PLoS One,2014,9(12):e113669.
[5]GUO X,LONG R,KREUZER M,et al.Importance of functional ingredients in yak milk-derived food on health of Tibetan nomads living under high-altitude stress:a review[J].Crit Rev Food Sci Nutr,2014,54(3):292-302.
[6]LONG R J,ZHANG D G,WANG X,et al.Effect of strategic feed supplementation on productive and reproductive performance in yak cows[J]. Prev Vet Med,1999,38 (3):195-206.
[7]PRAKASH B S,SARKAR M,MONDAL M.An update on reproduction in yak and mithun[J].Reprod Domest Anim,2008,43(Suppl 2):217-223.
[8]FU M,XIONG X R,LAN D L,et al.Molecular characterization and tissue distribution of estrogen receptor genes in domestic yak[J].Asian-Australas J Anim Sci,2014,27(12):1684-1690.
[9]XIAO X,ZI X D,NIU H R,et al.Effect of addition of FSH,LH and proteasome inhibitor MG132 to in vitro maturation medium on the developmental competence of yak (Bos grunniens) oocytes[J].Reprod Biol Endocrinol,2014,12:30.
[10]PAN L,GONG W,ZHOU Y,et al.A comprehensive transcriptomic analysis of infant and adult mouse ovary[J].Genomics Proteomics Bioinformatics,2014,12(5):239-248.
[11]MIAO X,LUO Q.Genome-wide transcriptome analysis between small-tail Han sheep and the Surabaya fur sheep using high-throughput RNA sequencing[J].Reproduction,2013,145(6):587-596.
[12]CUI Y,YU S J.An anatomical study of the internal genital organs of the yak at different ages[J].Vet J,1999,157(2):192-196.
[13]BECKER J,HACKL M,RUPP O,et al.Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing[J]. J Biotechnol,2011,156(3):227-235.
[14]权凯,张兆旺.母牦牛的繁殖特性[J].畜牧与饲料科学,2005,26(5):30-32.
QUAN K,ZHANG Z W.Reproductive characteristics of female yak[J].Animal Husbandry and Food Science,2005,26(5):30-32.(in Chinese)
[15]ZI X D,HE S M,LU H,et al.Induction of estrus in suckled female yaks (Bos grunniens) and synchronization of ovulation in the non-sucklers for timed artificial insemination using progesterone treatments and Co-Synch regimens[J].Anim Reprod Sci,2006,92(2):183-192.
[16]HU Q,MA T,WANG K,et al.The yak genome database:an integrative database for studying yak biology and high-altitude adaption[J].BMC Genomics,2012,13:600.
[17]AUDIC S,CLAVERIE J M.The significance of digital gene expression profiles[J].Genome Res,1997,7(10):986-995.
[18]EPPIG J J.Intercommunication between mammalian oocytes and companion somatic cells[J].Bioessays,1991,13(11):569-574.
[19]GILCHRIST R B,RITTER L J,ARMSTRONG D T.Oocyte-somatic cell interactions during follicle development in mammals[J].Anim Reprod Sci,2004,83:431-446.
[20]MAKKI M,SABOORI E,SABBAGHI M A,et al.Effects of selenium,calcium and calcium ionophore on human oocytes in vitro maturation in a chemically defined medium[J].Iran J Reprod Med,2012,10(4):343-348.
[21]ROZINEK J,RAJMON R,PETR J,et al.Ultrastructural localisation of calcium deposits in pig ovarian follicles[J].Anim Reprod Sci,2006,91(2):123-132.
[22]HEDIGER M A.Membrane permeability.The diversity of transmembrane transport processes[J].Curr Opin Cell Biol,1997,9(4):543-546.
[23]KIM A M,BERNHARDT M L,KONG B Y,et al.Zinc sparks are triggered by fertilization and facilitate cell cycle resumption in mammalian eggs[J].ACS Chem Biol,2011,6(7):716-723.
[24]ANCHORDOQUY J M,ANCHORDOQUY J P,SIRINI M A,et al.The importance of having zinc during in vitro maturation of cattle cumulus-oocyte complex:role of cumulus cells[J].Reprod Domest Anim,2014,49(5):865-874.
[25]AZUMA T,KONDO T,IKEDA S,et al.Effects of EDTA saturated with Ca2+ (Ca-EDTA) on pig,bovine and mouse oocytes at the germinal vesicle stage during maturation culture and the involvement of chelation of Zn2+ in pronuclear formation induction by Ca-EDTA[J].Reproduction,2002,124(2):235-240.
[26]SUNYER J O,BOSHRA H,LORENZO G,et al.Evolution of complement as an effector system in innate and adaptive immunity[J].Immunol Res,2003,27(3):549-564.
[27]APPLEDORN D M,MCBRIDE A,SEREGIN S,et al.Complex interactions with several arms of the complement system dictate innate and humoral immunity to adenoviral vectors[J].Gene Ther,2008,15(24):1606-1617.
[28]MOISEYEV G,GIVLI S,BAR-YOSEPH P Z.Fibrin polymerization in blood coagulation-a statistical model[J].J Biomech,2013,46(1):26-30.
[29]HARRIS C L,MIZUNO M,MORGAN B P.Complement and complement regulators in the male reproductive system[J].Mol Immunol,2006,43(2):57-67.
[30]MASTELLOS D,GERMENIS A E,LAMBRIS J D.Complement:an inflammatory pathway fulfilling multiple roles at the interface of innate immunity and development[J].Curr Drug Targets Inflamm Allergy,2005,4(1):125-127.
[31]HASTY L A,LAMBRIS J D,LESSEY B A,et al.Hormonal regulation of complement components and receptors throughout the menstrual cycle[J].Am J Obstet Gynecol,1994,170(1):168-175.
[32]DANIELSON P B.The cytochrome P450 superfamily:biochemistry,evolution and drug metabolism in humans[J].Curr Drug Metab,2002,3(6):561-597.
[33]KANDIEL M M,WATANABE G,TAYA K.Ovarian expression of inhibin-subunits,3beta-hydroxysteroid dehydrogenase,and cytochrome P450 aromatase during the estrous cycle and pregnancy of Shiba goats (Capra hircus)[J].Exp Anim,2010,59(5):605-614.
[34]SAHMI M,NICOLA E S,PRICE C A.Hormonal regulation of cytochrome P450 aromatase mRNA stability in non-luteinizing bovine granulosa cells in vitro[J].J Endocrinol,2006,190(1):107-115.
[35]FRADETTE C,DU SOUICH P.Hypoxia-inducible factor-1 and activator protein-1 modulate the upregulation of CYP3A6 induced by hypoxia[J].Br J Pharmacol,2003,140(6):1146-1154.
[36]SIMONSON T S,YANG Y,HUFF C D,et al.Genetic evidence for high-altitude adaptation in Tibet[J].Science,2010,329(5987):72-75.
[37]EDERY I.Circadian rhythms in a nutshell[J]. Physiol Genomics,2000,3(2):59-74.
[38]PIGGINS H D.Human clock genes[J].Ann Med,2002,34(5):394-400.