运用贝叶斯方法估计中国美利奴羊(新疆型)毛用性状及繁殖性状的遗传参数

doi:10.11843/j.issn.0366-6964.2020.07.007

畜牧兽医学报 ›› 2020, Vol. 51 ›› Issue (7): 1537-1547.doi: 10.11843/j.issn.0366-6964.2020.07.007

运用贝叶斯方法估计中国美利奴羊(新疆型)毛用性状及繁殖性状的遗传参数

魏趁^1,2, 关鸣轩¹, 付雪峰², 田月珍², 徐新明², 哈尼克孜·吐拉甫^2*, 黄锡霞^1*, 王雅春^3*, 田可川², 王志明⁴, 鲁兰·哈依尔别⁴

1. 新疆农业大学动物科学学院, 乌鲁木齐 830052;
2. 新疆畜牧科学院畜牧研究所, 乌鲁木齐 830011;
3. 中国农业大学, 北京 100193;
4. 塔城地区摩羯草畜科技实业有限公司, 额敏 834600

收稿日期:2019-11-29 出版日期:2020-07-25 发布日期:2020-07-22
通讯作者: 黄锡霞,主要从事分子及数量遗传学研究,E-mail:au-huangxixia@163.com;王雅春,主要从事分子及数量遗传学研究,E-mail:wangyachun@cau.edu.cn;田可川,主要从事动物遗传育种研究,E-mail:tiankechuan@163.com
作者简介:魏趁(1991-),女,河南人,博士生,主要从事分子数量遗传学研究,E-mail:414234667@qq.com
基金资助:
国家现代农业产业技术体系建设项目（CARS-39）；新疆绒毛用羊遗传育种与繁殖自治区重点实验室项目（XIYS1105）；自治区研究生科研创新项目（XJ2019G138）

Estimates of Genetic Parameters for Wool and Reproduction Traits in Chinese Merino Sheep(Xinjiang type) by Bayesian Method

WEI Chen^1,2, GUAN Mingxuan¹, FU Xuefeng², TIAN Yuezhen², XU Xinming², HANIKEZI Tulafu^2*, HUANG Xixia^1*, WANG Yachun^3*, TIAN Kechuan², WANG Zhiming⁴, LULAN Hayierbieke⁴

1. College of Animal Science, Xinjiang Agricultural University, Urumqi 830052, China;
2. Institute of Animal Science, Xinjiang Academy of Animal Science, Urumqi 830011, China;
3. China Agricultural University, Beijing 100193, China;
4. Tacheng Area Capricorn Animal Science and Technology Industrial Co. LTD, Emin 834600, China

Received:2019-11-29 Online:2020-07-25 Published:2020-07-22

摘要/Abstract

摘要： 为了解中国美利奴羊（新疆型）近年来遗传结构的变化趋势以及探讨毛用性状与繁殖性状的遗传关系，需要进一步研究这些性状的遗传力以及它们之间的关系。本研究收集额敏县聚鑫细毛羊养殖专业合作社1985-2018年中国美利奴羊（新疆型）共计9 428只羊毛生产记录和1987-2018共计5 887只年繁殖记录，运用BLUPF90软件结合Gibbs抽样方法，利用单性状模型对中国美利奴（新疆型）毛用性状（细度支数、等级、总评分、毛长、污毛重和鉴定时体重）和繁殖性状（配种次数、妊娠天数、胎产羔数和总产羔数）进行方差组分和遗传力估计，利用双性状模型分析毛用性状与繁殖性状之间的遗传相关与表型相关。结果显示，中国美利奴羊（新疆型）毛用性状细度支数、等级、总评分、毛长、污毛重、鉴定时体重的遗传力估计值分别为0.471±0.020、0.088±0.030、0.114±0.018、0.426±0.025、0.328±0.041、0.317±0.046；繁殖性状配种次数、妊娠天数、胎产羔数及总产羔数的遗传力估计值分别为0.056±0.009、0.022±0.010、0.120±0.018、0.163±0.016；毛用性状与胎产羔数、总产羔数之间的遗传相关范围为-0.031~0.286，鉴定时体重与胎产羔数（0.286）、总产羔数（0.204）遗传相关最高，细度支数与胎产羔数（-0.143）、总产羔数（-0.048）呈负的遗传相关；毛用性状与胎产羔数、总产羔数之间的表型相关范围为-0.210~0.216，毛长与总产羔数（0.216）表型相关最高，细度支数与胎产羔数（-0.137）、总产羔数（-0.210）呈显著负表型相关。本研究结果发现，毛用性状与繁殖性状之间存在一定的关系，这一结果可为今后制定中国美利奴羊育种规划提供数据基础，为选育优质高产、繁殖性能好的细毛羊提供理论依据，从而进一步提高细毛羊产业经济效益。

关键词: 中国美利奴羊(新疆型), 毛用性状, 繁殖性状, 遗传参数, 贝叶斯

Abstract: In order to understand the genetic trends of Chinese Merino sheep (Xinjiang type) in recent years and to explore the genetic relationship between wool and reproductive traits, it is necessary to further study the heritability of these traits and their relationship. The records of wool production performance of 9 428 individuals (from 1985 to 2018) and the records of reproduction performance of 5 887 individuals (from 1987 to 2018) for Chinese Merino sheep (Xinjiang type) were collected from Juxin fine wool sheep breeding professional cooperative of Emin county. Using a single trait model by BLUPF90 software combined with Gibbs sampling method estimated the variance components and heritabilities for wool (fineness, quality, total fleece grade, staple length, greasy fleece weight and body weight pre-shearing)and reproduction traits (number of inseminations, gestation length, litter size, total number of lambs born), and using two-trait model estimated the genetic correlation and phenotypic correlation between wool and reproductive traits. The results showed that estimates of heritabilities for fineness, quality, total fleece grade, staple length, greasy fleece weight and body weight pre-shearing were 0.471±0.020, 0.088±0.030, 0.114±0.018, 0.426±0.025, 0.328±0.041, and 0.317±0.046, respectively; estimates of heritabilies for number of inseminations, gestation length, litter size and total number of lambs born were 0.056±0.009, 0.022±0.010, 0.120±0.018, and 0.163±0.016, respectively; estimates of genetic correlation between wool traits and litter size, total number of lambs born varied from -0.031 to 0.286, body weight pre-shearing showed the strongest relation to litter size (0.286) followed by total number of lambs born (0.204), fineness were negatively related to litter size (-0.143) and total number of lambs born (-0.048); estimates of phenotypic correlation between wool traits and litter size, total number of lambs born varied from -0.210 to 0.216, staple length showed the strongest relation to total number of lambs born (0.216), fineness were negatively related to litter size (-0.137) and total number of lambs born (-0.210). The results of this study found that there was a certain relationship between wool and reproduction traits. It can provide a data basis for the future development of Chinese Merino sheep breeding program, and provide a theoretical basis for the selection of fine wool sheep with good quality, high yield and good reproductive performance, so as to further improve the economic benefits of fine wool sheep industry.

Key words: Chinese Merino sheep (Xinjiang type), wool traits, reproduction traits, genetic parameters, Bayesian inference

中图分类号:

S826.2

魏趁, 关鸣轩, 付雪峰, 田月珍, 徐新明, 哈尼克孜·吐拉甫, 黄锡霞, 王雅春, 田可川, 王志明, 鲁兰·哈依尔别. 运用贝叶斯方法估计中国美利奴羊(新疆型)毛用性状及繁殖性状的遗传参数[J]. 畜牧兽医学报, 2020, 51(7): 1537-1547.

WEI Chen, GUAN Mingxuan, FU Xuefeng, TIAN Yuezhen, XU Xinming, HANIKEZI Tulafu, HUANG Xixia, WANG Yachun, TIAN Kechuan, WANG Zhiming, LULAN Hayierbieke. Estimates of Genetic Parameters for Wool and Reproduction Traits in Chinese Merino Sheep(Xinjiang type) by Bayesian Method[J]. Acta Veterinaria et Zootechnica Sinica, 2020, 51(7): 1537-1547.

参考文献 40

[1]	孟丽娜,张英杰,刘月琴.绵羊繁殖性状相关基因研究进展[J].中国草食动物科学,2012(S1):57-60.MENG L N,ZHANG Y J,LIU Y Q.Review on genes involved in reproduction of sheep[J].China Herbivore Science,2012(S1):57-60.(in Chinese)
[2]	GERKEN M,RENIERI C,ALLAIN D,et al.Advances in fibre production science in South American Camelids and other fibre animals[M].Göttingen:Universitätsverlag Göttingen,2019.
[3]	PELMU Ç R S,GROSU H,ROTAR C M,et al.Estimation of the genetic parameters for reproduction traits using a threshold model in Teleorman Black head sheep breed[J].Arch Zootechn,2019,22(1):78-86.
[4]	RICHARDS J S,SLADEK M A,LEE G J.Cumu-lative reproductive performance effect on overall lifetime productivity in Merino sheep[J].Anim Prod Sci,2017,58(8):1470-1480.
[5]	SAFARI E,FOGARTY N M,GILMOUR A R,et al.Genetic correlations among and between wool,growth and reproduction traits in Merino sheep[J].J Anim Breed Genet,2007,124(2):65-72.
[6]	SWAN A A,PURVIS I W,PIPER L R.Genetic parameters for yearling wool production,wool quality and bodyweight traits in fine wool Merino sheep[J].Aust J Exp Agric,2008,48(9):1168-1176.
[7]	HUISMAN A E,BROWN D J.Genetic parameters for bodyweight,wool,and disease resistance and reproduction traits in merino sheep.2.Genetic relationships between bodyweight traits and other traits[J].Aust J Exp Agric,2008,48(9):1186-1193.
[8]	AFOLAYAN R A,FOGARTY N M,GILMOUR A R,et al.Genetic correlations between early growth and wool production of crossbred ewes and their subsequent reproduction[J].Anim Prod Sci,2009,49(1):17-23.
[9]	HUISMAN A E,BROWN D J.Genetic parameters for bodyweight,wool,and disease resistance and reproduction traits in Merino sheep.3.Genetic relationships between ultrasound scan traits and other traits[J].Anim Prod Sci,2009,49(4):283-288.
[10]	LEE G J,ATKINS K D,SLADEK M A.Genetic parameters for lifetime reproductive performance of Merino ewes[C]//Proceedings of the 18th Conference of the Association for the Advancement in Animal Breeding Genetics.Armidale:Association for the Advancement in Animal Breeding and Genetics,2009:382-385.
[11]	SWAN A A,BROWN D J,VAN DER WERF J H J.Genetic variation within and between subpopulations of the Australian Merino breed[J].Anim Prod Sci,2016,56(1):87-94.
[12]	黄锡霞,吴常信,田可川,等.用MTDFREML方法估计优质细毛羊主要经济性状的遗传参数[J].畜牧兽医学报,2005,36(10):1087-1090.HUANG X X,WU C X,TIAN K C,et al.Estimating main economictraits genetic parameters of high quality Merino sheep by MTDFREML[J].Acta Veterinaria et Zootechnica Sinica,2005,36(10):1087-1090.(in Chinese)
[13]	MALHADO C H M,MALHADO A C M,AMORIM RAMOS A,et al.Genetic parameters by Bayesian inference for dual purpose Jaffarabadi buffaloes[J].Arch Tierz,2012,55:567-576.
[14]	GHAVI HOSSEIN-ZADEH N.Estimates of genetic parameters and genetic trends for production and reproduction traits in Iranian buffaloes (Bubalus bubalis)[J].Anim Prod Sci,2017,57(2):216-222.
[15]	CARNEIRO JUNIOR J M,DE ASSIS G M L,EUCLYDES R F,et al.Estimation of variance components using Bayesian and frequentist inferences considering simulated data under heterogeneity of variance[J].R Bras Zootec,2007,36(5):1539-1548.
[16]	HOSSEIN-ZADEH N G,GHAHREMANI D.Baye-sian estimates of genetic parameters and genetic trends for morphometric traits and their relationship with yearling weight in Moghani sheep[J].Italian J Anim Sci,2018,17(3):586-592.
[17]	朱桦,徐新明,田可川,等.羊毛细度性状主观评定和客观检测对比分析[J].西北农业学报,2018,27(4):469-473.ZHU H,XU X M,TIAN K C,et al.Contrastive analysis of subjective evaluation and objective detection of wool fineness traits[J].Acta Agriculturae Boreali-Occidentalis Sinica,2018,27(4):469-473.(in Chinese)
[18]	MALCHIODI F,KOECK A,MASON S,et al.Genetic parameters for hoof health traits estimated with linear and threshold models using alternative cohorts[J].J Dairy Sci,2017,100(4):2828-2836.
[19]	TSURUTA S,LOURENCO D A L,MISZTAL I,et al.Genomic analysis of cow mortality and milk production using a threshold-linear model[J].J Dairy Sci,2017,100(9):7295-7305.
[20]	HANFORD K J,SNOWDER G D,VAN VLECK L D.Models with nuclear,cytoplasmic,and environmental effects for production traits of Columbia sheep[J].J Anim Sci,2003,81(8):1926-1932.
[21]	HANFORD K J,VAN VLECK L D,SNOWDER G D.Estimates of genetic parameters and genetic change for reproduction,weight,and wool characteristics of Rambouillet sheep[J].Small Rumin Res,2005,57(3-4):175-186.
[22]	HANFORD K J,VAN VLECK L D,SNOWDER G D.Estimates of genetic parameters and genetic trend for reproduction, weight, and wool characteristics of Polypay sheep[J].Livest Sci,2006,102(1-2):72-82.
[23]	努尔比亚·吾布力.应用MTDFREML法和动物模型BLUP对中国美利奴羊(新疆型)遗传参数估计和遗传评定[D].乌鲁木齐:新疆农业大学,2012.MUERBIYA W B L.Genetic parameter estimation and genetic evaluation in Chinese Merino sheep (Xinjiang Type) using MTDFREML and BLUP[D].Urumqi:Xinjiang Agricultural University,2012.(in Chinese)
[24]	DI J,ZHANG Y,TIAN K C,et al.Estimation of (co)variance components and genetic parameters for growth and wool traits of Chinese superfine merino sheep with the use of a multi-trait animal model[J].Livest Sci,2011,138(1-3):278-288.
[25]	MORTIMER S I,HATCHER S,FOGARTY N M,et al.Genetic correlations between wool traits and carcass traits in Merino sheep[J].J Anim Sci,2017,95(6):2385-2398.
[26]	DOMINIK S,SWAN A A.Genetic and phenotypic parameters for reproduction,production and bodyweight traits in Australian fine-wool Merino sheep[J].Anim Prod Sci,2016,58(2):207-212.
[27]	RATHER M A,SHANAZ S,GANAI N A,et al.Genetic evaluation of wool traits of Kashmir Merino sheep in organized farms[J]. Small Rumin Res,2019,177:14-17.
[28]	HAMADANI A,GANAI N A,KHAN N N,et al.Estimation of genetic,heritability,and phenotypic trends for weight and wool traits in Rambouillet sheep[J].Small Rumin Res,2019,177:133-140.
[29]	TAIT I M,KENYON P R,GARRICK D J,et al.Genetic and phenotypic correlations between production traits and adult body condition scores in New Zealand merino ewes[J].Proc New Zealand Soc Anim Prod,2018,78:71-75.
[30]	BOLORMAA S,BROWN D J,SWAN A A,et al.Genomic prediction of reproduction traits for Merino sheep[J].J Anim Sci,2017, 48(3):338-348.
[31]	MPETILE Z.Genetics of ovine resistance to gastrointestinal nematodes[D].Stellenbosch:Stellenbosch University,2019.
[32]	NOTTER D R,NGERE L,BURKE J M,et al.Genetic parameters for ewe reproductive performance and peri-parturient fecal egg counts and their genetic relationships with lamb body weights and fecal egg counts in Katahdin sheep[J].J Anim Sci,2018,96(5):1579-1589.
[33]	FOGARTY N M,INGHAM V M,GILMOUR A R,et al.Genetic evaluation of crossbred lamb production.1.Breed and fixed effects for birth and weaning weight of first-cross lambs,gestation length,and reproduction of base ewes[J].Australian J Agric Res,2005,56(5):443-453.
[34]	BROWN D J.Variance components for lambing ease and gestation length in sheep[J].Proc Assoc Adv Anim Breed Genet,2007,17:268-271.
[35]	JAFARI S,HASHEMI A,DARVISHZADEH R,et al.Genetic parameters of live body weight,body measurements,greasy fleece weight,and reproduction traits in Makuie sheep breed[J].Spanish J Agric Res,2014,12(3):653-663.
[36]	HATCHER S,PRESTON J W V.Genetic relationships of breech cover,wrinkle and wool coverage scores with key production traits in Australian Merino sheep[J].Small Rumin Res,2018,164:48-57.
[37]	SAFARI E,FOGARTY N M,GILMOUR A R.A review of genetic parameter estimates for wool,growth,meat and reproduction traits in sheep[J].Livest Product Sci,2005,92(3):271-289.
[38]	PIPER L R,SWAN A A,BREWER H G.Is increased fleece weight associated with reduced reproduction rate? Results from long term multi-trait selection flocks[C]//Proceedings of the 17th conference of the Association for the Advancement in Animal Breeding Genetics'.Australia,2007:103-106.
[39]	PIPER L R,SWAN A A,BREWER H G.Effects on lifetime reproductive performance of phenotypic selection for fleece weight,fibre diameter,body weight and related selection indexes[C]//Proceedings of the 18th conference of the Association for the Advancement in Animal Breeding Genetics'.Armidale,NSW:Association for the Advancement in Animal Breeding and Genetics,2009:374-377.
[40]	PIPER LR,SWAN AA,BREWER HG.Current flock effects on lifetime reproductive performance of simulated selection at hogget age in Merino sheep for fleece weight,fibre diameter,body weight and relevant selection indexes.III.High rainfall region results[C]//Proceedings of the 20th conference of the Association for the Advancement in Animal Breeding Genetics'.Napier,New Zealand:Association for the Advancement in Animal Breeding and Genetics,2013:102-105.

运用贝叶斯方法估计中国美利奴羊(新疆型)毛用性状及繁殖性状的遗传参数

Estimates of Genetic Parameters for Wool and Reproduction Traits in Chinese Merino Sheep(Xinjiang type) by Bayesian Method

RichHTML

PDF

可视化

摘要/Abstract

引用本文

使用本文

参考文献 40

相关文章 15

编辑推荐

Metrics

本文评价

[1]	张元旭, 李竟, 王泽昭, 陈燕, 徐凌洋, 张路培, 高雪, 高会江, 李俊雅, 朱波, 郭鹏. 动物遗传评估软件研究进展[J]. 畜牧兽医学报, 2024, 55(5): 1827-1841.
[2]	康佳威, 黄宣凯, 王志鹏, 张爱珍, 孟芳荣, 盖鹏, 包军付, 孙可心, 宋少康, 孙攀, 陈一川, 张蕾, 高圣玥, 常铭航. 大白猪生长、繁殖和体尺性状遗传参数估计[J]. 畜牧兽医学报, 2024, 55(5): 1936-1944.
[3]	李柯安宁, 杜丽丽, 安炳星, 邓天宇, 梁忙, 曹晟, 杜悦莹, 徐凌洋, 高雪, 张路培, 李俊雅, 高会江. 华西牛胴体及原始分割肉块重量性状遗传参数估计与全基因组关联分析[J]. 畜牧兽医学报, 2023, 54(9): 3664-3676.
[4]	胥磊, 张梦华, 张涛, 耿娟, 范守民, 杨光维, 郭杨, 邓强, 李金芝, 刘江卫, 黄锡霞, 王雅春. 基于主成分分析和因子分析估计新疆褐牛体型性状的遗传参数[J]. 畜牧兽医学报, 2023, 54(9): 3677-3688.
[5]	周辅臣, 叶健, 郭才金, 曾海玉, 吴珍芳, 董林松, 蔡更元. 杜洛克猪瘦肉率性状的窝效应分析及遗传参数估计[J]. 畜牧兽医学报, 2023, 54(6): 2288-2296.
[6]	呙明鹏, 孟源, 王宏浩, 王元, 车雷杰, 申莉, 王曦. 晋南牛不同生长阶段体重和体尺性状遗传参数估计[J]. 畜牧兽医学报, 2023, 54(4): 1452-1464.
[7]	师睿, 苏国生, 陈紫薇, 李想, 罗汉鹏, 刘林, 郭刚, 张毅, 王雅春, 张胜利, 张勤. 中国荷斯坦牛繁殖性状的基因组预测效果比较[J]. 畜牧兽医学报, 2022, 53(9): 2944-2954.
[8]	丁纪强, 李庆贺, 张高猛, 李森, 郑麦青, 文杰, 赵桂苹. 比较机器学习等算法对肉鸡产蛋性状育种值估计的准确性[J]. 畜牧兽医学报, 2022, 53(5): 1364-1372.
[9]	宋月通, 张汝美, 李彦芹, 李荣岭, 高运东, 仲跻峰, 薛光辉, 王玉东, 李建斌, 孙东晓. 山东省荷斯坦奶牛体型性状遗传参数估计及系谱世代数的影响[J]. 畜牧兽医学报, 2022, 53(5): 1384-1395.
[10]	常瑶, 苏国生, 李艳华, 李想, 麻柱, 王雅春. 基于系谱和基因组信息估计荷斯坦青年母牛体重性状遗传参数[J]. 畜牧兽医学报, 2022, 53(11): 3759-3768.
[11]	杨欣婷, 郑麦青, 谭晓冬, 赵桂苹, 黄超, 李森, 李韦, 文杰, 刘冉冉. 快大型黄羽肉鸡肉品质性状的遗传参数估计和关键基因挖掘[J]. 畜牧兽医学报, 2021, 52(9): 2416-2428.
[12]	贺婕妤, 王斌虎, 廖柱, 谢红涛, 易国强, 刘毓文, 敖红, 唐中林. 长白和大白猪主要生长性状的遗传参数估计[J]. 畜牧兽医学报, 2021, 52(8): 2115-2123.
[13]	张志诚, 陈梅娟, 艾军. 基于抗体筛查的美国猪群流行性腹泻病毒真流行率分布推断[J]. 畜牧兽医学报, 2021, 52(7): 2013-2024.
[14]	彭雅鑫, 刘军, 赵诗瑜, 徐在言, 左波. 猪RXRB基因SNPs检测及其与生长育肥和繁殖性状的关联分析[J]. 畜牧兽医学报, 2021, 52(3): 596-609.
[15]	陈紫薇, 师睿, 罗汉鹏, 田佳, 魏趁, 张伟新, 李委奇, 温万, 王雅晶, 王雅春. 宁夏地区荷斯坦牛青年牛繁殖性状遗传参数估计[J]. 畜牧兽医学报, 2021, 52(2): 344-351.