畜牧兽医学报 ›› 2008, Vol. 39 ›› Issue (4): 399-404.doi:

• 遗传繁育 • 上一篇    下一篇

猪泛素-B基因的克隆及组织表达谱分析

谢水华,李加琪,陈瑶生,张豪,王翀,梅盈洁,莫德林,李泽月   

  1. 1.华南农业大学动物科学学院,广州 510642;2.中山大学生命科学学院,广州 510275
  • 收稿日期:1900-01-01 修回日期:1900-01-01 出版日期:2008-04-24 发布日期:2008-04-24

Molecular Cloning and Tissue Specific Expression Profile of Porcine Ubiquitin B Gene

XIE Shui-hua, LI Jia-qi, CHEN Yao-sheng, ZHANG Hao, WANG Chong, MEI Ying-jie, MO De-lin, LI Ze-yue   

  1. 1 College of Animal Science, South China Agricultural University, Guangzhou 510642, China; 2 School of Life Science, Sun YatSen University, Guangzhou 510275, China
  • Received:1900-01-01 Revised:1900-01-01 Online:2008-04-24 Published:2008-04-24

摘要: 从人泛素-B(Ubiquitin B,UbB)基因mRNA序列出发,在猪的ESTs库中进行同源性搜索,通过电子克隆和进一步RT-PCR方法从猪肌肉组织总RNA中扩增出泛素-B基因部分cDNA序列(GenBank登录号:EF688558),长894 bp,其中在89~778 bp处包含一个完整的开放阅读框,编码229 个氨基酸。猪泛素-B基因由2个外显子和1个内含子构成(GenBank登录号:EF688559),内含子长657 bp,符合GT-AG规则。序列分析结果表明:猪泛素-B基因与已报道的人、黑猩猩、小家鼠、大鼠、鸡等物种的泛素-B基因高度同源,同源性分别为92%、91%、91%、91%、89%,氨基酸序列同源性为100%。半定量RT-PCR结果表明:泛素B基因在150日龄肥育猪心脏、肝脏、肾脏、小脑中的表达量较高,脾脏、肺脏、胃、膀胱、背最长肌、大脑次之,脂肪和下丘脑中的表达量最低,其在蓝塘与长白猪肝脏、脾脏、肺脏、肾脏、胃、膀胱、背最长肌等7个组织中的表达量存在差异。

Abstract: Blast (http://www.ncbi.nlm.nih.gov/blast) searches was employed to obtain homologous porcine ESTs in the porcineEST databases with the mRNA sequence of human ubiquitin B (UbB) gene (GenBank accession No NM018955). And a 894 bp cDNA fragment (GenBank accession No. EF688558) was amplified and subsequently sequenced using total RNA of Landrace pig longissimus dorsi muscle as the template after in silico cloning. The cDNA fragment of porcine UbB gene contains a complete ORF encoding a deduced protein of 229 amino acid residue. The porcine UbB gene contained two exons and one intron spanning approximately 1.5 kb, and the exon/intron boundaries confirmed the GT-AG rule. Analysis of the porcine UbB gene genomic DNA sequences showed that it was highly homologous to that of other species such as Homo sapiens (92%), Pan troglodytes (91%), Mus musculus (91%), Rattus norvegicus (91%) and Gallus gallus (89%), and all these species shared the same amino acid sequence. Result of semiquantitative RT-PCR revealed that UbB gene was highly expressed in heart, liver, kidney and cerebellum, followed by spleen, lung, stomach, bladder, longissimus dorsi muscle, cerebrum, and the lowest in fat and hypothalamus. At the same time, we find that the UbB gene was differentially expressed between Lantang pig and Landrace pig in liver, spleen, lung, kidney, stomach, bladder and longissimus dorsi muscle.