畜牧兽医学报 ›› 2025, Vol. 56 ›› Issue (9): 4393-4409.doi: 10.11843/j.issn.0366-6964.2025.09.022

• 遗传育种 • 上一篇    下一篇

梅花鹿茸、马鹿茸和赤鹿茸的差异蛋白质组学分析及候选特征肽段的筛选

贺慧慧1, 张汉达1, 张然然1, 王天骄1, 李功腾2, 葛云花1*, 邢秀梅1*   

  1. 1. 中国农业科学院特产研究所 农业农村部特种经济动物遗传育种与繁殖重点实验室, 长春 130112;
    2. 东北林业大学野生动物与自然保护地学院, 哈尔滨 150006
  • 收稿日期:2025-03-04 发布日期:2025-09-30
  • 通讯作者: 葛云花,主要从事鸟类学研究,E-mail:325828629@qq.com;邢秀梅,主要从事特种经济动物种质资源保护与遗传育种研究,E-mail:xingxiumei2004@126.com
  • 作者简介:贺慧慧(1998-),女,河南焦作人,硕士生,主要从事鹿茸蛋白质组学研究,E-mail:18317278873@163.com
  • 基金资助:
    特种动物种质资源库(TZDWZYK2024);茸用梅花鹿新品种(品系)示范推广(JARS-2024-0801-06)

Comparative Proteomics Analysis and Screening of Candidate Characteristic Peptides of Sika Deer Velvet Antler, Red Deer Velvet Antler and New Zealand Red Deer Velvet Antler

HE Huihui1, ZHANG Handa1, ZHANG Ranran1, WANG Tianjiao1, LI Gongteng2, GE Yunhua1*, XING Xiumei1*   

  1. 1. Key Laboratory of Genetics, Breeding and Reproduction of Special Economic Animals of Ministry of Agriculture and Rural Affairs, Institute of Special Animal and Plant Sciences of Chinese Academy of Agricultural Sciences, Changchun 130112, China;
    2. College of Wildlife and Protected Area, Northeast Forestry University, Harbin 150006, China
  • Received:2025-03-04 Published:2025-09-30

摘要: 旨在从差异蛋白质组学角度探究梅花鹿茸、马鹿茸和赤鹿茸的组分和肽段序列差异,为鹿茸的鉴别和质量评价提供精准的科学依据。本研究以成年健康公鹿采收的梅花鹿茸、马鹿茸和赤鹿茸组织为试验材料,共分为3个组,二杠梅花鹿茸10个,三杈马鹿茸10个,三杈赤鹿茸7个,样品处理后利用4D-DIA蛋白质组学技术,结合生物信息学方法对差异表达蛋白和差异肽段进行分析。结果,共鉴定到7 377个蛋白质和56 739个肽段,共有蛋白6 486个,共有肽段41 878个,共鉴定到640个差异表达蛋白。梅花鹿茸与马鹿茸比较组共筛选出461个差异表达蛋白,其中270个上调表达,191个下调表达。梅花鹿茸与赤鹿茸比较组共筛选出391个差异表达蛋白,其中246个上调表达,145个下调表达。马鹿茸与赤鹿茸比较组共筛选出96个差异表达蛋白,其中50个上调表达,46个下调表达。差异表达蛋白主要参与肽酶活性的负调控、急性炎症反应的调节、蛋白质激活级联的调控等生物过程和产生IgA的肠道免疫网络、补体与凝血级联等通路。梅花鹿茸、马鹿茸和赤鹿茸分别筛选到5个、1个和3个候选特征肽段。梅花鹿茸、马鹿茸和赤鹿茸的蛋白质表达量和肽段序列存在一定差异,该研究可为梅花鹿茸、马鹿茸与赤鹿茸的鉴别提供依据,也可为阐明梅花鹿茸、马鹿茸与赤鹿茸的生物学差异提供一定的理论支撑。

关键词: 梅花鹿茸, 马鹿茸, 赤鹿茸, 蛋白质组学

Abstract: The purpose of this study was to explore the differences in components and peptide sequences among sika deer velvet antlers, red deer velvet antlers and New Zealand red deer velvet antlers from the perspective of comparative proteomics, and to provide accurate scientific basis for the identification and quality evaluation of deer velvet antler. In this study, the tissues of sika deer velvet antlers, red deer velvet antlers and New Zealand red deer velvet antlers collected from adult healthy male deer were used as experimental materials and were divided into three groups, including 10 two-branched sika deer velvet antlers, 10 three-branched red deer velvet antlers and 7 three-branched New Zealand red deer velvet antlers. After sample processing, 4D-DIA proteomics technology was used in combination with bioinformatics methods to analyze differentially expressed proteins and differential peptides. A total of 7 377 proteins and 56 739 peptides were identified in this study. There were 6 486 proteins and 41 878 peptides common to sika deer velvet antler, red deer velvet antler and New Zealand red deer velvet antler. In total, 640 differentially expressed proteins were identified. The 461 differentially expressed proteins were identified in sika deer velvet antler vs. red deer velvet antler comparison group, which 270 were up-regulated and 191 were down-regulated. The 391 differentially expressed proteins were identified in sika deer velvet antler vs. New Zealand red deer velvet antler comparison group, which 246 were up-regulated and 145 were down-regulated. The 96 differentially expressed proteins were identified in red deer velvet antler vs. New Zealand red deer velvet antler comparison group, which 50 were up-regulated and 46 were down-regulated. The differentially expressed proteins were mainly involved in biological processes such as the negative regulation of peptidase activity, the regulation of acute inflammatory responses, and the regulation of protein activation cascades. The differentially expressed proteins were mainly involved in pathways such as the intestinal immune network for IgA production and the complement and coagulation cascades. The 5, 1 and 3 candidate characteristic peptides were screened for sika deer velvet antlers, red deer velvet antlers and New Zealand red deer velvet antlers, respectively. There are certain differences in protein expression levels and peptide sequences among sika deer velvet antlers, red deer velvet antlers and New Zealand red deer velvet antlers. This study can provide a basis for the identification of sika deer velvet antlers, red deer velvet antlers and New Zealand red deer velvet antlers, and also offer certain theoretical support for clarifying the differences in biological among sika deer velvet antlers, red deer velvet antlers and New Zealand red deer velvet antlers.

Key words: sika deer velvet antler, red deer velvet antler, New Zealand red deer velvet antler, proteomics

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