畜牧兽医学报 ›› 2009, Vol. 40 ›› Issue (2): 235-242.doi:

• 预防兽医 • 上一篇    下一篇

11株螨虫分离株的ITS-2序列分析与系统关系研究

古小彬1,张晓谦2,杨光友1*,贾小勇3,王帅1   

  1. 1.四川农业大学动物医学院, 雅安 625014;2. 绵阳市畜牧兽医局,绵阳 621000;3. 北京实验动物研究中心,北京 100012
  • 收稿日期:1900-01-01 修回日期:1900-01-01 出版日期:2009-02-24 发布日期:2009-02-24
  • 通讯作者: 杨光友

Sequence Analysis and Phylogenetic Relationships of 11 Mite Isolates Based on ITS-2 Gene

GU Xiao-bin1,ZHANG Xiao-qian2,YANG Guang-you1*,JIA Xiao-yong3, WANG Shuai1   

  1. 1.College of Veterinary Medicine, Sichuan Agricultural University, Ya′an 625014, China; 2. Pastoral Bureau of Mianyang, Sichuan Provice, Mianyang 621000, China; 3. Beijing Laboratory Animal Research Center, Beijing 100012, China
  • Received:1900-01-01 Revised:1900-01-01 Online:2009-02-24 Published:2009-02-24

摘要: 为探讨动物体上一些常见寄生螨虫的分类地位,对11株螨虫分离株的核糖体第二内部转录间隔区(ITS-2)基因序列进行测定,并从GenBank下载21条螨虫的ITS-2序列,用UPGMA法构建分子系统树。序列分析结果显示:6株疥螨分离株ITS-2基因全长均为361 bp,含有335个保守性位点,15个变异位点和9个简约信息位点;序列间的同源性为96.9%~99.7%。5株足螨分离株ITS-2基因存在长度上的变异(225~232 bp),序列中包括184个保守性位点,44个变异位点,9个简约信息位点;分离自黄牛和奶牛的4株足螨分离株的ITS-2序列同源性为92.4%~97.3%,而熊猫足螨分离株同黄牛、奶牛足螨分离株的同源性较低(78.7%~82.6%)。UPGMA显示:32株螨虫分离株分成2个支系,第1个支系包括疥螨科的疥螨属Sarcoptes和背肛螨属 Notoedres;第2个支系包括痒螨科的足螨属Chorioptes和痒螨属Psoroptes。从分析结果来看,笔者支持疥螨的单种说法;而足螨属中分离自熊猫的足螨和痒螨属中分离自水牛的痒螨的分类地位还有待进一步探讨。

Abstract: In order to clarify the taxonomic status of several species of mites which are common causative agents of mange in many animal populations, the second internal transcribed spacer (ITS-2) of the rRNA gene was sequenced and compared with the homologous sequences of 6 Sarcoptes isolates, 5 Chorioptes isolates, and 21 sequences of mites retrieved from GenBank. The phylogenetic relationships were reconstructed basing on 32 isolates using UPGMA method. The length of ITS-2 was 361 bp in 6 Sarcoptes isolates. In these six nucleotide sequences, a total of 335 nucleotide positions were conserved, 15 were variable sites, and 9 were parsimony informative sites. Homology analyses indicated that the identity levels of nucleotide of ITS-2 among the 6 isolates ranged from 96.9% to 99.7%. The length of ITS-2 in 5 Choriptes isolates were different (225.232 bp). The conserved sites, variable sites, parsimony informative sites were 184, 44 and 9, respectively. The sequence identity of Chorioptes mites from four kinds of cattle or cow ranged from 92.4% to 97.3%, the one between Chorioptes mite from Giant panda and other 4 isolates ranged from 78.7% to 82.6%. A phylogenetic tree constructed using the UPGMA method indicates that the mites examined in this study are clustered in the second major clade corresponding to their second families. The first clade includes the genus of Sarcoptes and Notoedres, the second clade is comprised of the genus of Chorioptes and Psoroptes. According to the homology analysis and phylogenetic analysis, we support the view that the genus Sarcoptes consists of only one species, and the taxonomic status of Chorioptes isolates from Giant Panda and the Psoroptes isolates from buffalo are still to be verificated furtherly.