畜牧兽医学报 ›› 2007, Vol. 38 ›› Issue (2): 105-109.doi:

• 遗传繁育 •    下一篇

猪新基因NPM1的克隆、序列分析与染色体定位

唐中林[1,2] 李勇[1] 赵书红[1] 刘榜[1] 樊斌[1] 朱猛进[1] 李奎[1,2]   

  1. [1]华中农业大学农业动物遗传育种与繁殖教育部重点实验室,武汉430070 [2]中国农业科学院北京畜牧兽医研究所,北京100094
  • 收稿日期:1900-01-01 修回日期:1900-01-01 出版日期:2007-02-25 发布日期:2007-02-25
  • 通讯作者: 唐中林

Cloning, Sequence Analysis and Chromosome Mapping of Porcine New NPM1 Gene

  • Received:1900-01-01 Revised:1900-01-01 Online:2007-02-25 Published:2007-02-25

摘要: 克隆了猪NPM1基因的cDNA和第4内含子序列,并利用生物信息学方法进行验证。所得cDNA序列全长1195bp且包含一个完整的开放阅读框,编码294个氨基酸。内含子序列长300bp,遵循GT/AG剪接法则。序列分析表明,该基因与已报道的人、大鼠和小鼠等物种的NPM1基因高度同源,氨基酸序列同源性分别为95%、91%和91%。该基因编码的蛋白具有Nucleoplasmin保守功能域。用体细胞杂种板将该基因定位在猪16号染色体q21区段,辐射杂种板定位结果表明该基因与猪16号染色体上SW977标记紧密连锁。

Abstract: The cDNA and fourth intron sequences of porcine NPM1 gene were cloned, and verified by bioinformatics method. The cDNA fragment was 1 195 bp with an entire open reading frame (ORF), encoding 294 amino acids. The intron fragment was 300 bp and splice junctions follow ‘GT/AG’ rule. The analysis of sequence revealed that the porcine NPM1 gene was highly homologous with that of other species such as human (95%), mouse (91%) and rattus norvegicus (91%) in amino acid. The protein encoded by porcine NPM1 gene had a conserved domain ‘Nucleoplasmin'. This gene was assigned to SSC16q21 region and closely linked to SW977 with the LOD of 9.16 by SCHP and IMpRH mapping, respectively.